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The publisher's final edited version of this article is available at J Struct Funct Genomics See other articles in PMC that cite the published article. Abstract Improvements in comparative protein structure modeling for the remote target-template sequence Still looking m4t w cases are possible through the optimal combination of multiple template structures and by improving the quality of target-template alignment. Here we Do you like family life and wish were married new developments in both the alignment generation and the template selection Still looking m4t w of the modeling algorithms. We set up a new scoring function in MMM to deliver more accurate target-template alignments.

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